miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|171478827|gb|FE967469.1|FE967469 CATTTCTAAGCTCTCAACTCCTAACTTTGCTGCTTCTTCTTCATCATCATCGTCTAGACTTCTTTCATCTCAACCAAAAG
TTTCAATAAATTTCTACAACAGATCTTCTATTAACAAAGGGTTCTCTAATTCTAAGTTATCACTTCGCAGAAACACAGAG
ACTAGTTCGTTAAATGTTAGATGTTCTAAAGGTGATGGAAATGGGACACATGCAAAGAAAACAGTCCTTCATGATCTCTA
TGACAAACAAGGACAAAGTCCTTGGTATGATAATCTTTGCCGACCTGTTACAGATTTGTTACCATTGATTTCAAGTGGAG
TTAGAGGTGTCACAAGTAACCCCGCGATATTCCAGAAAGCAATATCGACATCAAGCGCGTACAATGATCAGTTCAGGGAG
CTTGTTCTAGCAGGAAAGAACATTGAAGATGCTTACTGGGAGCTCGTGATTAAGGATATCCAAGATGCGTGCAAACTTTT
TGAATCCATCTATGATGAAACTGATGGAGCTGATGGATATGTATCTGTAGAAGTTTCCCCTCAACTTGCTGATGATACAC
TAGGGACAGTAGAGGCTGCTAAGTGGCTTCATAAAGTGGTTAACTGTAAAAATGCTTACATAAAGATCCCTGCAACTGCA
GAGTGCGTTCCTTCTATCAGGGATGTTATCTCACTTGGCATAAGCGTCAATGTAACTCTCATTTTCTCTCTTTCGCGATA
TGAAGCAGTCATTGATGCTTACTTGGATG




Most similar to sp|Q118F4|TAL_TRIEI

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q118F4|TAL_TRIEI Transaldolase OS=Trichodesmium erythraeum
           (strain IMS101) GN=tal PE=3 SV=1
          Length = 380

 Score =  142 bits (359), Expect = 2e-33
 Identities = 75/170 (44%), Positives = 107/170 (62%), Gaps = 4/170 (2%)
 Frame = +2

Query: 251 GQSPWYDNLCRPVTDLLPLIS----SGVRGVTSNPAIFQKAISTSSAYNDQFRELVLAGK 418
           GQS W DNL R + +   L S     G+RG+TSNPAIF+KAI+ ++ Y+      + A K
Sbjct: 13  GQSIWMDNLSRNIIESGELKSMIGKKGIRGITSNPAIFEKAIAGNAIYDADIEAGIKASK 72

Query: 419 NIEDAYWELVIKDIQDACKLFESIYDETDGADGYVSVEVSPQLADDTLGTVEAAKWLHKV 598
           ++ + Y  LV KDI+DAC +F  +Y+ET G DGY+S+EV P +A DT  T+  A   +  
Sbjct: 73  SVIEIYESLVFKDIRDACDIFMPVYEETKGLDGYISIEVPPTIAKDTESTISEAIRYYTA 132

Query: 599 VNCKNAYIKIPATAECVPSIRDVISLGISVNVTLIFSLSRYEAVIDAYLD 748
           +  +N  IKIP T E +P++  VIS GI+VNVTL+FS+  Y     AY++
Sbjct: 133 IGRENLMIKIPGTPEGLPAVTRVISEGINVNVTLLFSVESYINTAWAYIE 182